Yokoyama Laboratory

Publication in 2005-2006

1	Saito, S., Sawai, K., Minamihashi, A., Ugai, H., Murata. T., and Yokoyama, K.: Derivation, maintenance, and induction of the differentiation in vitro of equine embryonic stem cells. Embryonic stem cell protocols; vol. 1 (ed. by K. Turksen) (Humana Press Inc., Totowa, NJ), Methods in Molecular Biology 329, pp.59-79 (2005).
2	Seo, E., Abei, M., Wakayama, M., Fukuda, K., Ugai, H., Murata, T., Todoroki, T., Tanaka, N., Hamada, H., and Yokoyama, K.: Effective gene therapy for biliary tract cancer by a conditionally replicative adenovirus expressing uracil phosphoribosyltransferase: Significance of timing of 5-fluorouracil administration. Cancer Research 65, 546-552 (2005).
3	Yokoyama, K., Murata, T., Ugai, H., Suzuki, E., Terashima, M., Kujime, Y., Inamoto, S., Hirose, M., Inabe, K., and Yamasaki, T.: Recombinant Virus BANK for gene delivery. Science 307, 1722 (2005).
4	Ugai, H., Yamasaki, T., Hirose, M., Inabe, K., Kujime, Y., Terashima, M., Liu, B., Tang, H., Zhao, M., Murata, T., Kimura, M., Pan, J., Obata, Y., Hamada, H., and Yokoyama, K.: Purification of infectious adenovirus in two hours by ultracentrifugation and tangential flow filtration. Biochem. Biophys. Res. Commu. 331, 1053-1060 (2005).
5	Ugai, H., Murata, T., Nagamura, Y., Ugawa, Y., Suzuki, E., Nakata, H., Kujime, Y., Inamoto, S., Hirose, M., Inabe, K., Terashima, M., Yamasaki, T., Liu, B., Nakade, K., Pan, J., Kimura, M., Saito, I., Hamada, H., Obata, Y., and Yokoyama, K.: A database of recombinant viruses and recombinant viral vectors available from the RIKEN DNA bank. J. Gene Med. 7, 1148-1157 (2005).
6	Dietze, E. C., Bowie, M. L., Mrozek, K., Caldwell, E., Neal, C., Marjoram, R. J., Troch, M. M., Bean, G. R., Yokoyama, K., Ibarra, C. A. and Seewaldt, V. L.: CREB-binding protein regulates apoptosis and growth of HMECs grown in reconstituted ECM via laminin-5. J. Cell Science 118, 5005-5022 (2005).
7	Kojima, Y., Honda, K., Kotegawa, H., Kushihata, F., Kobayashi, N., Yokoyama, K., and Hamada, H.: Adenovirus-mediated p53 gene transfer to the bile duct by direct administration into the bile in a rat cholangitis model. J. Surgical Res. 128, 126-131 (2005).
8	Ugai, H., Inabe, K., Yamasaki, T., Murata, T., Obata, Y., Hamada, H., and Yokoyama, K.: Accumulation of infectious mutants in stocks during the propagation of fiber-modified recombinant adenoviruses. Biochem. Biophys. Res. Commu. 337, 806-814 (2005).
9	Yamasaki, T., Noguchi, M., Liu, B., Nakade, K., Wang, P-C., Murata, T., and Yokoyama, K.: Jun dimenigation protein 2: A multifunctional transcription factor in mammalian cells. Current Genomics 6, 351-364 (2005).
10	Saito, S., Yokoyama, K., Tamagawa, T., and Ishiwata, I.: Derivation and induction of the differentiation of animal ES cells as well as human pluripotent stem cells derived from fetal membrane. Human Cell 18, 135-141 (2005).
11	Liu, B., Yamasaki, T., Jin, C., Nakade, K., Kato, K., Nagata, K., Murata, T., and Yokoyama, K.: Gene silencing and histone modification by JDP2, a repressor that binds to the AP-1 regulatory sequence, during the differentiation of F9 embryonic carcinoma cells. Current Topics in Genetics, Transworld Research Network, Kerala, India, 1, 1-17 (2006).
12	Da, L., Yokoyama, K., Li, T., and Zhao, M.: Dual promoters control the cell-specific expression of the human cell death-inducing DFF45-like effector B gene. Biochem. J. 393, 779-788 (2006).
13	Jin, C., Kato, K., Chimura, T., Yamasaki, T., Nakade, K., Murata, T., Li, H., Pan, J., Zhao, M., Sun, K., Chiu, R., Ito, T., Nagata, K., Horikoshi, M., and Yokoyama, K.: Regulation of histone acetylation and nucleosome assembly by transcription factor JDP2. Nature Structural & Molecular Biology 13, 331-338 (2006).
14	Hayashi, R., Goto, Y., Ikeda, R., Yokoyama, K., and Yoshida, K.: CDCA4 is an E2F transcription factor family-induced nuclear factor that regulates E2F-dependent transcriptional activation and cell proliferation. J. Biol. Chem. 281, 35633-35648 (2006).
15	Lu, Y-C., Song, J., Cho, H-Y., Fan, G., Yokoyama, K., and Chiu, R.: Cyclophilin a protects peg3 from hypermethylation and inactive histone modification. J. Biol. Chem. 281, 39081-39087 (2006).